1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10431748g0010

MA_10431748g0010


Description : Ubiquitin-40S ribosomal protein S27a-1 OS=Oryza sativa subsp. japonica (sp|q9arz9|r27aa_orysj : 84.7)


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431748g0010
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Aop_g18726 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70711 UBQ11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.27G039400.1 UBQ3, Ceric.27G039400 UBQ ubiquitin-fold protein & original description:... 0.02 OrthoFinder output from all 47 species
LOC_Os08g08760.1 LOC_Os08g08760 Polyubiquitin 3 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Len_g01986 No alias component *(eL40) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g28108 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g53062 UBQ6 component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Sam_g20114 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 43
No external refs found!