AMTR_s00061p00029690 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00061.4

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP54 component


Gene families : OG_01_0004006 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004006_tree ,
OG_02_0004078 (LandPlants) Phylogenetic Tree(s): OG_02_0004078_tree ,
OG_03_0004081 (SeedPlants) Phylogenetic Tree(s): OG_03_0004081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00061p00029690
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
Mp1g19000.1 No alias component SRP54 of SRP (signal recognition particle) complex 0.02 Archaeplastida
Mp1g19000.1 No alias component SRP54 of SRP (signal recognition particle) complex 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEA Interproscan
MF GO:0008312 7S RNA binding IEA Interproscan
CC GO:0048500 signal recognition particle IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004125 Signal_recog_particle_SRP54_M 327 427
IPR013822 Signal_recog_particl_SRP54_hlx 6 83
IPR000897 SRP54_GTPase_dom 102 296
No external refs found!