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  5. MA_10431482g0010

MA_10431482g0010


Description : NUFIP snoRNP rRNA methylation complex assembly factor


Gene families : OG0003682 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003682_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431482g0010
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT5G18440 No alias CONTAINS InterPro DOMAIN/s: Nuclear fragile X mental... 0.04 OrthoFinder output from all 47 species
Adi_g082531 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
Aev_g07950 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
Als_g30603 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Als_g63113 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Aob_g11786 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
Ceric.10G029400.1 Ceric.10G029400 snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.05 OrthoFinder output from all 47 species
Ceric.30G030300.1 Ceric.30G030300 not classified & original description: pacid=50608069... 0.04 OrthoFinder output from all 47 species
Dcu_g50146 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
Ehy_g24829 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
GSVIVT01027215001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.03 OrthoFinder output from all 47 species
Gb_31525 No alias NUFIP snoRNP rRNA methylation complex assembly factor 0.05 OrthoFinder output from all 47 species
Lfl_g27692 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.02 OrthoFinder output from all 47 species
Msp_g42252 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Pir_g07400 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.03 OrthoFinder output from all 47 species
Pnu_g23882 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.04 OrthoFinder output from all 47 species
Solyc01g096920.3.1 Solyc01g096920 NUFIP snoRNP rRNA methylation complex assembly factor 0.07 OrthoFinder output from all 47 species
Spa_g15180 No alias snoRNP rRNA methylation complex assembly factor *(NUFIP)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR019496 NUFIP1_cons_dom 641 680
No external refs found!