LOC_Os06g09880 (Os06g0199100)


Aliases : Os06g0199100

Description : 33.99 development.unspecified embryo defective 1270 (EMB1270)


Gene families : OG_01_0007710 (Gene family) Phylogenetic Tree(s): OG0007710_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g09880
Cluster HCCA cluster: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT3G18110 EMB1270 Pentatricopeptide repeat (PPR) superfamily protein 0.06 Gene family
GSVIVT01024457001 No alias 33.99 development.unspecified embryo defective 1270 (EMB1270) 0.05 Gene family
MA_712594g0010 No alias 33.99 development.unspecified embryo defective 1270 (EMB1270) 0.04 Gene family
MA_8988374g0010 No alias 33.99 development.unspecified embryo defective 1270 (EMB1270) 0.02 Gene family
Zm00001d045014 GRMZM2G053170,... 33.99 development.unspecified embryo defective 1270 (EMB1270) 0.13 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 356 387
IPR002885 Pentatricopeptide_repeat 783 811
IPR002885 Pentatricopeptide_repeat 1099 1127
IPR002885 Pentatricopeptide_repeat 220 264
IPR002885 Pentatricopeptide_repeat 396 443
IPR002885 Pentatricopeptide_repeat 838 896
IPR002885 Pentatricopeptide_repeat 909 967
IPR002885 Pentatricopeptide_repeat 279 338
IPR002885 Pentatricopeptide_repeat 1013 1072
IPR002885 Pentatricopeptide_repeat 453 512
No external refs found!