1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10431382g0010

MA_10431382g0010 (SDE1, RDR6, SGS2)


Aliases : SDE1, RDR6, SGS2

Description : Probable RNA-dependent RNA polymerase SHL2 OS=Oryza sativa subsp. japonica (sp|q8lhh9|shl2_orysj : 275.0)


Gene families : OG0001039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001039_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10431382g0010
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00026960 SMD1, RDR2,... RNA biosynthesis.siRNA biogenesis.RDR2 ssRNA polymerase 0.03 OrthoFinder output from all 47 species
AT4G11130 SMD1, RDR2 RNA-dependent RNA polymerase 2 0.05 OrthoFinder output from all 47 species
Ceric.03G095000.1 ATRDRP1, RDR1,... not classified & original description: pacid=50572384... 0.02 OrthoFinder output from all 47 species
Dac_g08042 ATRDRP1, RDR1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01011643001 ATRDRP1, RDR1 RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_28426 ATRDRP1, RDR1 RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 1 85
No external refs found!