LOC_Os06g09390 (Os06g0194000)


Aliases : Os06g0194000

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein ?//CONTAINS one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g09390
Cluster HCCA cluster: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
AT1G12980 ESR1, DRN Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.02 Gene family
AT1G64380 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G14230 RAP2.2 related to AP2 2 0.02 Gene family
AT4G16750 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
Cpa|evm.model.tig00000093.224 No alias No description available 0.01 Gene family
GSVIVT01013905001 No alias No description available 0.02 Gene family
GSVIVT01013914001 No alias No description available 0.02 Gene family
GSVIVT01013916001 No alias No description available 0.03 Gene family
GSVIVT01013923001 No alias No description available 0.02 Gene family
GSVIVT01013929001 No alias No description available 0.03 Gene family
GSVIVT01016684001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01028050001 No alias No description available 0.03 Gene family
GSVIVT01030515001 No alias No description available 0.03 Gene family
LOC_Os01g21120 Os01g0313300 No description available 0.02 Gene family
LOC_Os02g34270 No alias No description available 0.03 Gene family
LOC_Os05g29810 Os05g0361700 No description available 0.02 Gene family
LOC_Os05g41760 Os05g0497200 No description available 0.02 Gene family
Smo428344 PACid_15413251 No description available 0.01 Gene family
Solyc04g078640.2.1 Solyc04g078640.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc05g052410.2.1 Solyc05g052410.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc06g050520.2.1 Solyc06g050520.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc06g063070.3.1 Solyc06g063070.3 No description available 0.02 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.02 Gene family
Solyc07g053740.1.1 Solyc07g053740.1 No description available 0.02 Gene family
Solyc09g075420.3.1 Solyc09g075420.3 No description available 0.03 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.02 Gene family
Zm00001d002760 GRMZM2G475678 No description available 0.02 Gene family
Zm00001d002761 GRMZM5G805505 No description available 0.02 Gene family
Zm00001d022461 GRMZM2G025062 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d028017 GRMZM2G003466 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
Zm00001d031673 GRMZM2G309731 No description available 0.02 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d038320 GRMZM2G100727 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d052087 GRMZM2G018398 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 115 163
No external refs found!