Aliases : HUB2
Description : RING-HC-class E3 ligase
Gene families : OG0001584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001584_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00024p00181230 | HUB2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
AT1G55250 | HUB2 | histone mono-ubiquitination 2 | 0.08 | OrthoFinder output from all 47 species | |
Adi_g010133 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g059356 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
Adi_g059765 | HUB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g088508 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Adi_g104160 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g20568 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g02632 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g13983 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g01150 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Als_g16567 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g09718 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene28102.t1 | HUB2, Aspi01Gene28102 | E3 ubiquitin ligase *(HUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene55696.t1 | HUB2, Aspi01Gene55696 | E3 ubiquitin ligase *(HUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g10519 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Cba_g32079 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.14G031800.1 | RDO4, HUB1,... | E3 ubiquitin ligase *(HUB) & original description:... | 0.08 | OrthoFinder output from all 47 species | |
Ceric.21G031900.1 | HUB2, Ceric.21G031900 | E3 ubiquitin ligase *(HUB) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000169.18 | HUB2 | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
Cre14.g625802 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g03836 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g20436 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g04023 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g04109 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01018223001 | RDO4, HUB1 | Protein degradation.peptide tagging.Ubiquitin... | 0.09 | OrthoFinder output from all 47 species | |
Gb_15023 | HUB2 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Gb_28646 | HUB2 | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g46450.1 | RDO4, HUB1,... | RING-HC-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Len_g08188 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g12516 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g11288 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Lfl_g26973 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_10433679g0010 | RDO4, HUB1 | RING-HC-class E3 ligase | 0.06 | OrthoFinder output from all 47 species | |
MA_164157g0010 | HUB2 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Mp6g03540.1 | RDO4, HUB1 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Msp_g06195 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ore_g08622 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pir_g10428 | RDO4, HUB1 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g06419 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g01320 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g07599 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g12359 | No alias | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g35279 | No alias | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Smo175555 | HUB2 | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g006040.3.1 | HUB2, Solyc01g006040 | RING-HC-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Spa_g08099 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Spa_g12693 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g25091 | RDO4, HUB1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g55706 | HUB2 | E3 ubiquitin ligase *(HUB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g06090 | HUB2 | E3 ubiquiTin ligase *(HUB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Tin_g15227 | RDO4, HUB1 | E3 ubiquiTin ligase *(HUB) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e001968_P003 | HUB2, Zm00001e001968 | RING-HC-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e013143_P005 | RDO4, HUB1,... | RING-HC-class E3 ligase | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |