LOC_Os06g08850 (Os06g0188000)


Aliases : Os06g0188000

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide-gated channel 17 (CNGC17)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g08850
Cluster HCCA cluster: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.02 Gene family
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.03 Gene family
AT4G30360 ATCNGC17, CNGC17 cyclic nucleotide-gated channel 17 0.04 Gene family
AT5G57940 CNGC5, ATCNGC5 cyclic nucleotide gated channel 5 0.02 Gene family
Cpa|evm.model.tig00021244.33 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.01 Gene family
GSVIVT01027087001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
GSVIVT01028711001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Smo113786 PACid_15418666 No description available 0.02 Gene family
Smo266514 PACid_15408982 No description available 0.02 Gene family
Solyc02g086990.3.1 Solyc02g086990.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc06g051920.3.1 Solyc06g051920.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc07g005590.3.1 Solyc07g005590.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc07g006510.3.1 Solyc07g006510.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Solyc08g069140.3.1 Solyc08g069140.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc11g069580.2.1 Solyc11g069580.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc12g010010.2.1 Solyc12g010010.2 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d002099 GRMZM2G023037 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Zm00001d021388 GRMZM2G135651 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
Zm00001d037035 GRMZM2G129375,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Zm00001d053401 GRMZM2G148118 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 76 400
No external refs found!