LOC_Os06g08380 (Os06g0182300)


Aliases : Os06g0182300

Description : 3.6 minor CHO metabolism.callose Responsible for the synthesis of callose deposited at the primary cell wall of meiocytes, tetrads and microspores. Required for exine formation during microgametogenesis and for pollen viability. Highest expression in meiocytes, tetrads, microspores and mature pollen. callose synthase 5 (CALS5)


Gene families : OG_01_0000082 (Gene family) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g08380
Cluster HCCA cluster: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01025362001 No alias 3.6 minor CHO metabolism.callose encodes a gene similar... 0.02 Gene family
LOC_Os02g14900 Os02g0247000 3.6 minor CHO metabolism.callose encodes a protein... 0.02 Gene family
MA_211228g0010 No alias 3.6 minor CHO metabolism.callose encodes a gene similar... 0.01 Gene family
MA_246547g0010 No alias 3.6 minor CHO metabolism.callose encodes a gene similar... 0.02 Gene family
MA_6205g0020 No alias 3.6 minor CHO metabolism.callose encodes a gene similar... 0.02 Gene family
Solyc11g005980.2.1 Solyc11g005980.2 3.6 minor CHO metabolism.callose Responsible for the... 0.03 Gene family
Solyc11g005985.1.1 Solyc11g005985.1 3.6 minor CHO metabolism.callose Responsible for the... 0.06 Gene family
Zm00001d035841 GRMZM2G353905 3.6 minor CHO metabolism.callose Responsible for the... 0.04 Gene family
Zm00001d035842 No alias 3.6 minor CHO metabolism.callose Responsible for the... 0.08 Gene family
Zm00001d044566 GRMZM2G022841,... 3.6 minor CHO metabolism.callose encodes a gene similar... 0.02 Gene family
Zm00001d044584 GRMZM2G465764,... 3.6 minor CHO metabolism.callose encodes a gene similar... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEA InterProScan
MF GO:0003843 1,3-beta-D-glucan synthase activity IEA InterProScan
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR026899 FKS1-like_dom1 361 472
IPR039431 Vta1/CALS_N 77 202
IPR003440 Glyco_trans_48 1133 1733
IPR003440 Glyco_trans_48 1041 1126
No external refs found!