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  5. MA_10430113g0010

MA_10430113g0010


Description : CENH3-recruitment factor (KNL2/Mis18)


Gene families : OG0002725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002725_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10430113g0010

Target Alias Description ECC score Gene Family Method Actions
Dcu_g12068 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g29417 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g34610.1 LOC_Os01g34610 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g28040.1 LOC_Os04g28040 CENH3-recruitment factor (KNL2/Mis18) 0.03 OrthoFinder output from all 47 species
Len_g22487 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11386 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g015710.3.1 Solyc04g015710 Protein EMBRYO DEFECTIVE 1674 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g07078 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19080 No alias CENH3-recruitment factor *(KNL2) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!