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  5. MA_10430109g0010

MA_10430109g0010


Description : Putative pentatricopeptide repeat-containing protein At5g59900 OS=Arabidopsis thaliana (sp|q9fje6|pp437_arath : 422.0)


Gene families : OG0005897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005897_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10430109g0010
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
MA_12730g0010 No alias Pentatricopeptide repeat-containing protein At5g55840... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 331 380
IPR002885 Pentatricopeptide_repeat 576 625
IPR002885 Pentatricopeptide_repeat 507 555
IPR002885 Pentatricopeptide_repeat 681 730
IPR002885 Pentatricopeptide_repeat 402 450
IPR002885 Pentatricopeptide_repeat 261 310
IPR002885 Pentatricopeptide_repeat 191 240
IPR002885 Pentatricopeptide_repeat 751 799
IPR002885 Pentatricopeptide_repeat 121 170
IPR002885 Pentatricopeptide_repeat 642 675
IPR002885 Pentatricopeptide_repeat 470 499
IPR002885 Pentatricopeptide_repeat 90 119
No external refs found!