LOC_Os06g07978 (Os06g0177100)


Aliases : Os06g0177100

Description : 29.5.11.20 protein.degradation.ubiquitin.proteasom Encodes the alpha-3 subunit of 20s proteasome. 20S proteasome alpha subunit C1 (PAC1)


Gene families : OG_01_0005379 (Gene family) Phylogenetic Tree(s): OG0005379_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g07978
Cluster HCCA cluster: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
Cre10.g418100 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.01 Gene family
MA_474079g0010 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.01 Gene family
Solyc02g081700.1.1 Solyc02g081700.1 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA InterProScan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 30 214
IPR000426 Proteasome_asu_N 5 27
No external refs found!