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  5. MA_10429891g0010

MA_10429891g0010 (SPL2)


Aliases : SPL2

Description : transcription factor (SBP)


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429891g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.03 OrthoFinder output from all 47 species
AT1G69170 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 OrthoFinder output from all 47 species
Adi_g068657 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g33190 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27599 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1820.g107212 No alias not classified & original description: CDS=1-336 0.04 OrthoFinder output from all 47 species
Dac_g09282 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g46580.1 SPL3, LOC_Os04g46580 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os08g39890.1 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
LOC_Os09g31438.1 AtSPL9, SPL9,... transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
MA_10428252g0010 SPL8 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g43554 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g062980.4.1 SPL3, Solyc07g062980 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Solyc10g018780.3.1 SPL8, Solyc10g018780 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Spa_g06557 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13068 AtSPL9, SPL9 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 5 85
No external refs found!