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  5. MA_10429174g0010

MA_10429174g0010


Description : no hits & (original description: none)


Gene families : OG0000395 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000395_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10429174g0010
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00066200 ATCYCD2;1,... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.05 OrthoFinder output from all 47 species
AMTR_s00190p00017930 ATCYCD2;1,... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.03 OrthoFinder output from all 47 species
Adi_g034336 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aev_g01039 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aev_g20141 CYCD1;1, ATCYCD1;1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20231 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ala_g20505 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ala_g22032 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Als_g01667 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Als_g12082 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Als_g13442 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Als_g19518 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47164 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aop_g03463 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aop_g18668 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene39255.t1 ATCYCD2;1,... regulatory protein *(CYCD) of cell cycle & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene51365.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene60777.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene67685.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene72055.t1 CYCD3, CYCD3;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72259.t1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035662 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060216 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Cba_g00886 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Cba_g00990 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Cba_g16891 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Cba_g16892 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ceric.12G016800.1 CYCD1;1,... regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dac_g11389 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dac_g11700 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Dac_g16428 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Dcu_g18290 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ehy_g07454 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ehy_g10860 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01000125001 CYCD5;1 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.02 OrthoFinder output from all 47 species
GSVIVT01003674001 CYCD6;1 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.06 OrthoFinder output from all 47 species
GSVIVT01009432001 CYCD3;3 Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 OrthoFinder output from all 47 species
Gb_03361 CYCD3, CYCD3;1 cyclin (CYCD) 0.03 OrthoFinder output from all 47 species
Gb_34092 CYCD1;1, ATCYCD1;1 cyclin (CYCD) 0.05 OrthoFinder output from all 47 species
LOC_Os03g10650.1 CYCD5;1, LOC_Os03g10650 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
LOC_Os03g27420.1 ATCYCD2;1,... cyclin (CYCD) 0.03 OrthoFinder output from all 47 species
Len_g12518 ATCYCD2;1, CYCD2;1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09649 CYCD4;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Mp8g17230.1 ATCYCD2;1, CYCD2;1 cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
Nbi_g01101 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g03493 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g07386 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Nbi_g35383 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Nbi_g43541 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ore_g37998 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Ppi_g04462 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ppi_g06303 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Ppi_g10385 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.05 OrthoFinder output from all 47 species
Ppi_g11937 CYCD3, CYCD3;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Ppi_g14272 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010523 ATCYCD2;1, CYCD2;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014749 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020437 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0134.g022297 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023971 No alias regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0198.g025534 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sam_g06392 No alias regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Sam_g07890 No alias regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Sam_g14687 No alias regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Solyc02g079370.3.1 CYCD6;1, Solyc02g079370 cyclin (CYCD) 0.06 OrthoFinder output from all 47 species
Solyc04g078470.3.1 CYCD3;3, Solyc04g078470 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Solyc12g087900.2.1 ATCYCD2;1,... cyclin (CYCD) 0.03 OrthoFinder output from all 47 species
Spa_g47878 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Tin_g00808 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Tin_g03949 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Tin_g06567 CYCD1;1, ATCYCD1;1 regulatory protein *(CYCD) of cell cycle & original... 0.02 OrthoFinder output from all 47 species
Tin_g46147 CYCD3;3 regulatory protein *(CYCD) of cell cycle & original... 0.04 OrthoFinder output from all 47 species
Zm00001e009441_P003 CYCD3, CYCD3;1,... cyclin (CYCD) 0.04 OrthoFinder output from all 47 species
Zm00001e018000_P001 CYCD1;1,... cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Zm00001e020929_P001 CYCD7;1, CYCD7,... cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Zm00001e033498_P001 CYCD3;3, Zm00001e033498 cyclin (CYCD) 0.02 OrthoFinder output from all 47 species
Zm00001e034029_P002 CYCD1;1,... cyclin (CYCD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 18 86
No external refs found!