MA_10429045g0010

Description : ABC transporter B family member 15 OS=Arabidopsis thaliana (sp|q9lhd1|ab15b_arath : 207.0)

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_10429045g0010
Cluster	HCCA: Cluster_151

Target	Alias	Description	ECC score	Gene Family Method
Aob_g24610	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.18G065900.1	PGP2, Ceric.18G065900	subfamily ABCB transporter & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g37248	PGP9	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g38855	PGP11	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g00972	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g09158	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g29451	ABCB19,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os05g04600.1	PGP11, LOC_Os05g04600	ABC transporter B family member 4 OS=Arabidopsis...	0.08	OrthoFinder output from all 47 species
LOC_Os05g04610.1	ATPGP4, PGP4,...	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
LOC_Os05g47490.1	PGP11, LOC_Os05g47490	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Len_g45184	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Len_g57621	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g10739	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Lfl_g19646	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Mp2g06270.1	PGP20	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Mp2g11920.1	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Msp_g34237	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g28031	ABCB19,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g49419	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c17_16450V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	44	152

External Links

No external refs found!

MA_10429045g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation