Mp8g10190.1


Description : pectate lyase


Gene families : OG_01_0000134 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000134_tree ,
OG_02_0000111 (LandPlants) Phylogenetic Tree(s): OG_02_0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g10190.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00186640 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
AMTR_s00039p00189000 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AMTR_s00171p00044290 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AT2G02720 No alias Pectate lyase family protein 0.02 Archaeplastida
AT3G07010 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G24670 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G48900 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01000592001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.07 Archaeplastida
GSVIVT01008053001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
GSVIVT01011348001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01020067001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01020068001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
GSVIVT01029048001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
Gb_02248 No alias pectate lyase 0.03 Archaeplastida
Gb_19802 No alias pectate lyase 0.04 Archaeplastida
LOC_Os02g12300.1 No alias pectate lyase 0.03 Archaeplastida
LOC_Os06g38510.2 No alias pectate lyase 0.03 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.02 Archaeplastida
MA_10205415g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10332686g0010 No alias pectate lyase 0.02 Archaeplastida
MA_10430145g0030 No alias pectate lyase 0.04 Archaeplastida
MA_10437227g0010 No alias pectate lyase 0.03 Archaeplastida
MA_170547g0010 No alias pectate lyase 0.03 Archaeplastida
MA_203992g0010 No alias pectate lyase 0.02 Archaeplastida
MA_66914g0010 No alias pectate lyase 0.06 Archaeplastida
MA_91467g0010 No alias pectate lyase 0.03 Archaeplastida
MA_91467g0020 No alias pectate lyase 0.02 Archaeplastida
MA_956526g0010 No alias pectate lyase 0.02 Archaeplastida
MA_97947g0010 No alias pectate lyase 0.02 Archaeplastida
Mp3g01000.1 No alias pectate lyase 0.03 Archaeplastida
Pp3c10_20140V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c13_1640V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c14_6710V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c17_16370V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c1_33130V3.1 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
Pp3c1_35100V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c21_16990V3.1 No alias Pectate lyase family protein 0.04 Archaeplastida
Pp3c22_19760V3.1 No alias Pectate lyase family protein 0.03 Archaeplastida
Pp3c22_19780V3.1 No alias Pectate lyase family protein 0.03 Archaeplastida
Pp3c3_35190V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
Smo439243 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 Archaeplastida
Solyc01g010740.4.1 No alias pectate lyase 0.06 Archaeplastida
Solyc02g087670.3.1 No alias pectate lyase 0.03 Archaeplastida
Solyc02g093580.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc03g113150.3.1 No alias pectate lyase 0.04 Archaeplastida
Solyc06g071020.3.1 No alias pectate lyase 0.02 Archaeplastida
Solyc06g071840.3.1 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc06g083580.4.1 No alias pectate lyase 0.04 Archaeplastida
Solyc09g008380.3.1 No alias pectate lyase 0.03 Archaeplastida
Solyc09g061890.3.1 No alias pectate lyase 0.03 Archaeplastida
Solyc11g008140.3.1 No alias pectate lyase 0.03 Archaeplastida
Zm00001e024959_P001 No alias pectate lyase 0.03 Archaeplastida
Zm00001e037311_P001 No alias pectate lyase 0.03 Archaeplastida
AMTR_s00039p00186640 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 LandPlants
AMTR_s00039p00189000 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 LandPlants
AT1G30350 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
AT3G01270 No alias Pectate lyase family protein 0.01 LandPlants
AT3G07010 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
AT3G24670 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
AT5G48900 No alias Pectin lyase-like superfamily protein 0.02 LandPlants
GSVIVT01000592001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.07 LandPlants
GSVIVT01008053001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 LandPlants
GSVIVT01020067001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 LandPlants
GSVIVT01020068001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 LandPlants
GSVIVT01024239001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 LandPlants
GSVIVT01029048001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 LandPlants
Gb_02248 No alias pectate lyase 0.03 LandPlants
Gb_19802 No alias pectate lyase 0.04 LandPlants
LOC_Os02g12300.1 No alias pectate lyase 0.01 LandPlants
LOC_Os06g05260.1 No alias pectate lyase 0.01 LandPlants
MA_101171g0010 No alias pectate lyase 0.02 LandPlants
MA_10205415g0010 No alias pectate lyase 0.03 LandPlants
MA_10332686g0010 No alias pectate lyase 0.02 LandPlants
MA_10353668g0010 No alias pectate lyase 0.01 LandPlants
MA_10426822g0020 No alias pectate lyase 0.02 LandPlants
MA_10430145g0030 No alias pectate lyase 0.02 LandPlants
MA_10437227g0010 No alias pectate lyase 0.03 LandPlants
MA_203992g0010 No alias pectate lyase 0.02 LandPlants
MA_66914g0010 No alias pectate lyase 0.06 LandPlants
MA_91467g0010 No alias pectate lyase 0.03 LandPlants
MA_91467g0020 No alias pectate lyase 0.02 LandPlants
MA_956526g0010 No alias pectate lyase 0.02 LandPlants
MA_97947g0010 No alias pectate lyase 0.02 LandPlants
Mp3g01000.1 No alias pectate lyase 0.03 LandPlants
Pp3c1_33130V3.1 No alias Pectin lyase-like superfamily protein 0.06 LandPlants
Smo407495 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 LandPlants
Smo439243 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.04 LandPlants
Solyc02g087670.3.1 No alias pectate lyase 0.03 LandPlants
Solyc02g093580.4.1 No alias pectate lyase 0.02 LandPlants
Solyc03g113150.3.1 No alias pectate lyase 0.03 LandPlants
Solyc06g071020.3.1 No alias pectate lyase 0.02 LandPlants
Solyc06g071840.3.1 No alias Probable pectate lyase 22 OS=Arabidopsis thaliana... 0.05 LandPlants
Solyc06g083580.4.1 No alias pectate lyase 0.04 LandPlants
Solyc09g008380.3.1 No alias pectate lyase 0.03 LandPlants
Solyc09g061890.3.1 No alias pectate lyase 0.03 LandPlants
Solyc11g008140.3.1 No alias pectate lyase 0.03 LandPlants
Zm00001e024959_P001 No alias pectate lyase 0.01 LandPlants
Zm00001e037311_P001 No alias pectate lyase 0.01 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002022 Pec_lyase 135 317
No external refs found!