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  5. MA_10428665g0010

MA_10428665g0010 (ATSIG5, SIG5, SIGE)


Aliases : ATSIG5, SIG5, SIGE

Description : RNA polymerase sigma factor sigE, chloroplastic/mitochondrial OS=Arabidopsis thaliana (sp|q9znx9|sige_arath : 113.0)


Gene families : OG0006267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428665g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00252960 ATSIG5, SIG5,... RNA biosynthesis.organelle... 0.04 OrthoFinder output from all 47 species
AMTR_s00015p00253000 ATSIG5, SIG5,... RNA polymerase sigma factor sigE,... 0.05 OrthoFinder output from all 47 species
Ala_g08597 ATSIG5, SIG5, SIGE basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g20817 ATSIG5, SIG5, SIGE basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21613.t1 ATSIG5, SIG5,... basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os05g50930.1 ATSIG5, SIG5,... basal transcription factor (Sigma) 0.02 OrthoFinder output from all 47 species
Msp_g47380 ATSIG5, SIG5, SIGE basal Sigma-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014355 ATSIG5, SIG5, SIGE basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g22251 ATSIG5, SIG5, SIGE basal Sigma-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Tin_g20273 ATSIG5, SIG5, SIGE basal Sigma-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e032596_P002 ATSIG5, SIG5,... basal transcription factor (Sigma) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!