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Description : Prolycopene isomerase 1, chloroplastic OS=Oncidium hybrid cultivar (sp|q52qw3|crts1_onchc : 80.1)
Gene families : OG0002889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002889_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10428660g0010 | |
| Cluster | HCCA: Cluster_128 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00071p00187330 | evm_27.TU.AmTr_v1... | Prolycopene isomerase, chloroplastic OS=Daucus carota | 0.08 | OrthoFinder output from all 47 species | |
| AT1G57770 | No alias | FAD/NAD(P)-binding oxidoreductase family protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03316 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g49491 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g06469 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g07926 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g00730 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g33225 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene09756.t1 | Aspi01Gene09756 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08553 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g27219 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001258.10 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020723.8 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cre09.g407200 | No alias | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.03 | OrthoFinder output from all 47 species | |
| Cre16.g674950 | No alias | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g23383 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g10069 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g14193 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g06829 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g23170 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g15650 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01023233001 | No alias | Prolycopene isomerase, chloroplastic OS=Daucus carota | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39488 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g62510.1 | LOC_Os03g62510 | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.06 | OrthoFinder output from all 47 species | |
| Len_g21505 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g05426 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g17990.1 | No alias | Prolycopene isomerase, chloroplastic OS=Solanum... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g08605 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10834 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0052.g014061 | No alias | not classified & original description: CDS=115-1746 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07020 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g010180.4.1 | Solyc05g010180 | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g23774 | No alias | not classified & original description: none | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e011669_P002 | Zm00001e011669 | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003849 | 3-deoxy-7-phosphoheptulonate synthase activity | IEP | HCCA |
| BP | GO:0006082 | organic acid metabolic process | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0009072 | aromatic amino acid metabolic process | IEP | HCCA |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0043436 | oxoacid metabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |