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  5. LOC_Os06g06480

LOC_Os06g06480 (Os06g0159725, Os06g0159750)


Aliases : Os06g0159725, Os06g0159750

Description : 28.1.3.2.3 DNA.synthesis/chromatin structure.histone.core.H3 Histone superfamily protein


Gene families : OG_01_0000050 (Gene family) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g06480
Cluster HCCA cluster: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G09200 No alias Histone superfamily protein 0.04 Gene family
AT3G27360 No alias Histone superfamily protein 0.05 Gene family
AT4G40030 No alias Histone superfamily protein 0.03 Gene family
AT4G40040 No alias Histone superfamily protein 0.04 Gene family
AT5G10390 No alias Histone superfamily protein 0.06 Gene family
AT5G10400 No alias Histone superfamily protein 0.05 Gene family
AT5G65360 No alias Histone superfamily protein 0.04 Gene family
Cre06.g265000 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.02 Gene family
GSVIVT01025316001 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.03 Gene family
GSVIVT01025318001 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.08 Gene family
GSVIVT01026582001 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.04 Gene family
GSVIVT01027073001 No alias 28.1 DNA.synthesis/chromatin structure Encodes a... 0.08 Gene family
GSVIVT01032047001 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.05 Gene family
GSVIVT01034510001 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.11 Gene family
LOC_Os06g04030 Os06g0130900 28.1.3.2.3 DNA.synthesis/chromatin... 0.03 Gene family
LOC_Os06g06510 Os06g0160100 28.1.3.2.3 DNA.synthesis/chromatin... 0.05 Gene family
MA_113838g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.05 Gene family
MA_131523g0020 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.03 Gene family
MA_153387g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.05 Gene family
MA_159785g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.04 Gene family
MA_172878g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.03 Gene family
MA_17527g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.05 Gene family
MA_197719g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.11 Gene family
MA_210354g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.03 Gene family
MA_350032g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.13 Gene family
MA_356208g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.04 Gene family
MA_475294g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.02 Gene family
MA_561217g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.07 Gene family
MA_56411g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.07 Gene family
MA_74555g0010 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.12 Gene family
Smo103546 PACid_15409822 No description available 0.02 Gene family
Smo171192 PACid_15406716 No description available 0.02 Gene family
Smo176603 PACid_15402605 No description available 0.04 Gene family
Smo269004 PACid_15414065 No description available 0.02 Gene family
Smo438193 PACid_15419016 No description available 0.03 Gene family
Smo78992 PACid_15403087 No description available 0.03 Gene family
Solyc01g079110.3.1 Solyc01g079110.3 28.1.3.2.3 DNA.synthesis/chromatin... 0.04 Gene family
Solyc01g080600.3.1 Solyc01g080600.3 28.1.3.2.3 DNA.synthesis/chromatin... 0.08 Gene family
Solyc01g086820.3.1 Solyc01g086820.3 28.1.3.2.3 DNA.synthesis/chromatin... 0.07 Gene family
Solyc02g077480.1.1 Solyc02g077480.1 28.1.3.2.3 DNA.synthesis/chromatin... 0.08 Gene family
Solyc04g081150.3.1 Solyc04g081150.3 28.1.3.2.3 DNA.synthesis/chromatin... 0.03 Gene family
Solyc05g051515.1.1 Solyc05g051515.1 28.1.3.2.3 DNA.synthesis/chromatin... 0.04 Gene family
Solyc10g008910.1.1 Solyc10g008910.1 28.1.3.2.3 DNA.synthesis/chromatin... 0.1 Gene family
Solyc11g010240.2.1 Solyc11g010240.2 35.2 not assigned.unknown 0.05 Gene family
Solyc12g056540.1.1 Solyc12g056540.1 28.1.3.2.3 DNA.synthesis/chromatin... 0.1 Gene family
Zm00001d003725 GRMZM2G447984 28.1.3.2.3 DNA.synthesis/chromatin... 0.14 Gene family
Zm00001d003730 GRMZM5G864735 28.1.3.2.3 DNA.synthesis/chromatin... 0.06 Gene family
Zm00001d012276 No alias 28.1.3.2.3 DNA.synthesis/chromatin... 0.09 Gene family
Zm00001d016723 GRMZM2G451254 28.1.3.2.3 DNA.synthesis/chromatin... 0.09 Gene family
Zm00001d025406 GRMZM2G355773 28.1.3.2.3 DNA.synthesis/chromatin... 0.11 Gene family
Zm00001d036036 GRMZM2G171387 28.1.3.2.3 DNA.synthesis/chromatin... 0.03 Gene family
Zm00001d036250 GRMZM2G376957 28.1.3.2.3 DNA.synthesis/chromatin... 0.1 Gene family
Zm00001d039790 GRMZM2G401581 28.1.3.2.3 DNA.synthesis/chromatin... 0.11 Gene family
Zm00001d041672 GRMZM2G475899 28.1.3.2.3 DNA.synthesis/chromatin... 0.06 Gene family
Zm00001d042730 GRMZM2G078314 28.1.3.2.3 DNA.synthesis/chromatin... 0.05 Gene family
Zm00001d045268 GRMZM2G130079 28.1.3.2.3 DNA.synthesis/chromatin... 0.07 Gene family
Zm00001d045475 GRMZM2G118355 28.1.3.2.3 DNA.synthesis/chromatin... 0.09 Gene family
Zm00001d050697 GRMZM2G418258 28.1.3.2.3 DNA.synthesis/chromatin... 0.09 Gene family

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan
MF GO:0003677 DNA binding IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 130 246
No external refs found!