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MA_10428571g0010


Description : protein factor (USP39) of U4/U6 U5 small nuclear ribonucleoprotein particle (snRNP)


Gene families : OG0005722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005722_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428571g0010
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT4G22285 No alias Ubiquitin C-terminal hydrolases superfamily protein 0.03 OrthoFinder output from all 47 species
Aop_g09374 No alias component *(USP39) of U4/U6.U5 tri-snRNP complex &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene01393.t1 Aspi01Gene01393 component *(USP39) of U4/U6.U5 tri-snRNP complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene01394.t2 Aspi01Gene01394 component *(USP39) of U4/U6.U5 tri-snRNP complex &... 0.03 OrthoFinder output from all 47 species
Dac_g00812 No alias component *(USP39) of U4/U6.U5 tri-snRNP complex &... 0.02 OrthoFinder output from all 47 species
Nbi_g15028 No alias component *(USP39) of U4/U6.U5 tri-snRNP complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g11614 No alias component *(USP39) of U4/U6.U5 tri-snRNP complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001607 Znf_UBP 105 166
No external refs found!