MA_10428509g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 286.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428509g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00246970 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.02 OrthoFinder output from all 47 species
AMTR_s00010p00260120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g74600,... 0.01 OrthoFinder output from all 47 species
AMTR_s00032p00190360 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
AMTR_s00033p00240190 evm_27.TU.AmTr_v1... Cell cycle.organelle machineries.DNA... 0.01 OrthoFinder output from all 47 species
AMTR_s00039p00023570 EMB2758 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
AMTR_s00039p00210570 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
AMTR_s00065p00033910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g49740... 0.03 OrthoFinder output from all 47 species
AMTR_s00081p00019740 CRR22,... Pentatricopeptide repeat-containing protein At5g27110... 0.02 OrthoFinder output from all 47 species
AMTR_s00088p00045930 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
AMTR_s00095p00039180 OTP86,... Pentatricopeptide repeat-containing protein At3g63370,... 0.01 OrthoFinder output from all 47 species
AT3G05240 MEF19 mitochondrial editing factor 19 0.05 OrthoFinder output from all 47 species
Adi_g101211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21218 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g02380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36188 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g19006 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30744 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08082.t1 EMB2261, Aspi01Gene08082 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene28076.t1 Aspi01Gene28076 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31490.t1 Aspi01Gene31490 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene49892.t1 Aspi01Gene49892 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene71401.t1 REME1, Aspi01Gene71401 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0006.g010197 OTP82 not classified & original description: CDS=163-897 0.05 OrthoFinder output from all 47 species
Azfi_s0032.g024917 No alias not classified & original description: CDS=1-3621 0.01 OrthoFinder output from all 47 species
Azfi_s0148.g053129 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2052 0.03 OrthoFinder output from all 47 species
Cba_g07299 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19882 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.06G009700.1 VAC1, ECB2,... not classified & original description: pacid=50619980... 0.03 OrthoFinder output from all 47 species
Ceric.23G075300.1 Ceric.23G075300 not classified & original description: pacid=50609898... 0.01 OrthoFinder output from all 47 species
Dac_g23036 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16096 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16394 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16907 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18082 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22355 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23187 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23999 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24097 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25445 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g30664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38510 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g42001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g43777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48000 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g49752 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g52150 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16902 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01019231001 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
GSVIVT01029885001 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Gb_16062 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Len_g22109 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g04793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05740 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06745 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07760 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07794 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08416 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13946 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g14377 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g15216 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_139163g0010 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.07 OrthoFinder output from all 47 species
MA_42343g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_472579g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.06 OrthoFinder output from all 47 species
MA_60579g0010 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.12 OrthoFinder output from all 47 species
Msp_g43552 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28389 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30729 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04516 REME1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g20675 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g06501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53562 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g58118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59292 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015410 No alias not classified & original description: CDS=1-2730 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020144 No alias not classified & original description: CDS=1-1437 0.01 OrthoFinder output from all 47 species
Sam_g03180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50108 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc02g014360.3.1 LOI1, MEF11,... RNA editing factor (MEF11) 0.02 OrthoFinder output from all 47 species
Solyc09g009950.4.1 Solyc09g009950 RNA editing factor (MEF10) 0.02 OrthoFinder output from all 47 species
Solyc11g006940.3.1 Solyc11g006940 component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.03 OrthoFinder output from all 47 species
Solyc11g066920.1.1 CRR28, Solyc11g066920 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Spa_g20180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g23704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30136 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e008203_P002 Zm00001e008203 Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 76 200
No external refs found!