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  5. MA_10428475g0010

MA_10428475g0010 (PFU2, UBC23)


Aliases : PFU2, UBC23

Description : Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana (sp|q9zvx1|ubc23_arath : 417.0)


Gene families : OG0001231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428475g0010

Target Alias Description ECC score Gene Family Method Actions
Ceric.1Z185900.1 Ceric.1Z185900 not classified & original description: pacid=50597207... 0.02 OrthoFinder output from all 47 species
Ceric.25G053400.1 Ceric.25G053400 not classified & original description: pacid=50594560... 0.04 OrthoFinder output from all 47 species
Lfl_g30926 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.03 OrthoFinder output from all 47 species
Mp3g21400.1 PFU2, UBC23 Probable ubiquitin-conjugating enzyme E2 23... 0.01 OrthoFinder output from all 47 species
Nbi_g01476 PFU2, UBC23 E2 ubiquitin-conjugating protein *(PHO2) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g04374 UBC24, PHO2, ATUBC24 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g24311 UBC24, PHO2, ATUBC24 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo105943 UBC25, PFU1 Probable ubiquitin-conjugating enzyme E2 25... 0.01 OrthoFinder output from all 47 species
Solyc02g078210.3.1 UBC24, PHO2,... ubiquitin-conjugating E2 protein (PHO2) 0.04 OrthoFinder output from all 47 species
Zm00001e032387_P001 UBC24, PHO2,... ubiquitin-conjugating E2 protein (PHO2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 356 500
No external refs found!