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Description : Prolycopene isomerase, chloroplastic OS=Arabidopsis thaliana (sp|q9m9y8|crtso_arath : 101.0)
Gene families : OG0002889 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002889_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_10428345g0020 | |
| Cluster | HCCA: Cluster_128 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00071p00187330 | evm_27.TU.AmTr_v1... | Prolycopene isomerase, chloroplastic OS=Daucus carota | 0.08 | OrthoFinder output from all 47 species | |
| Adi_g052232 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g03316 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g49491 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06469 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g05632 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g07926 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g00730 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33225 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene09756.t1 | Aspi01Gene09756 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08553 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g27219 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.23G052400.1 | Ceric.23G052400 | not classified & original description: pacid=50610225... | 0.02 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001258.10 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020723.8 | No alias | No description available | 0.02 | OrthoFinder output from all 47 species | |
| Cre09.g407200 | No alias | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.02 | OrthoFinder output from all 47 species | |
| Cre16.g674950 | No alias | Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g23383 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g10069 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g14193 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g23170 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g15650 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Gb_39487 | No alias | Prolycopene isomerase, chloroplastic OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_39488 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g62510.1 | LOC_Os03g62510 | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g21505 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05426 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g17990.1 | No alias | Prolycopene isomerase, chloroplastic OS=Solanum... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g48604 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g08605 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g10834 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0052.g014061 | No alias | not classified & original description: CDS=115-1746 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07020 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo229587 | No alias | Prolycopene isomerase 1, chloroplastic OS=Oncidium... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g010180.4.1 | Solyc05g010180 | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g23774 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e011669_P002 | Zm00001e011669 | Prolycopene isomerase, chloroplastic OS=Daucus carota... | 0.06 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006766 | vitamin metabolic process | IEP | HCCA |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
| BP | GO:0006771 | riboflavin metabolic process | IEP | HCCA |
| MF | GO:0008703 | 5-amino-6-(5-phosphoribosylamino)uracil reductase activity | IEP | HCCA |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | HCCA |
| MF | GO:0010181 | FMN binding | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |