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Aliases : PTAC10, PDE312
Description : no hits & (original description: none)
Gene families : OG0006411 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006411_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00005p00203240 | PTAC10, PDE312,... | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00354p00009120 | PTAC10, PDE312,... | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.06 | OrthoFinder output from all 47 species | |
| AT3G48500 | PTAC10, PDE312 | Nucleic acid-binding, OB-fold-like protein | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g052271 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g07933 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g07043 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0353.g066638 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g04661 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.02G035300.1 | PTAC10, PDE312,... | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g13818 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04961 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01008490001 | PTAC10, PDE312 | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_30753 | PTAC10, PDE312 | PAP3/TAC10 cofactor of plastid-encoded RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
| Gb_30755 | PTAC10, PDE312 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30756 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g67570.1 | PTAC10, PDE312,... | PAP3/TAC10 cofactor of plastid-encoded RNA polymerase | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g08250.1 | PTAC10, PDE312 | PAP3/TAC10 cofactor of plastid-encoded RNA polymerase | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g00670 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g28130 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g15491 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g49470 | No alias | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo438805 | PTAC10, PDE312 | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g111050.3.1 | PTAC10, PDE312,... | PAP3/TAC10 cofactor of plastid-encoded RNA polymerase | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g12662 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g09197 | PTAC10, PDE312 | cofactor of plastid-encoded RNA polymerase *(PAP3/TAC10)... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028549_P001 | PTAC10, PDE312,... | PAP3/TAC10 cofactor of plastid-encoded RNA polymerase | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046422 | violaxanthin de-epoxidase activity | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |