Aliases : AtRABA4a, RABA4a
Description : A-class RAB GTPase
Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G65270 | AtRABA4a, RABA4a | RAB GTPase homolog A4A | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0409.g068486 | ATRABA4C, RABA4C, SMG1 | A-class RAB GTPase & original description: CDS=114-785 | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01033357001 | RABA4D, ATRABA4D | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g28692 | RABA4D, ATRABA4D | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g01882 | RABA4D, ATRABA4D | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g096220.3.1 | RABA3, ATRAB-A3,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g064020.3.1 | RABA4D,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g010100.2.1 | AtRABA4a,... | A-class RAB GTPase | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e000673_P001 | AtRABA4a,... | A-class RAB GTPase | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e012878_P002 | AtRABA4a,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
CC | GO:0000786 | nucleosome | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 12 | 172 |
No external refs found! |