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  5. MA_10428137g0010

MA_10428137g0010 (AtRABA4a, RABA4a)


Aliases : AtRABA4a, RABA4a

Description : A-class RAB GTPase


Gene families : OG0001718 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001718_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10428137g0010

Target Alias Description ECC score Gene Family Method Actions
AT5G65270 AtRABA4a, RABA4a RAB GTPase homolog A4A 0.03 OrthoFinder output from all 47 species
Azfi_s0409.g068486 ATRABA4C, RABA4C, SMG1 A-class RAB GTPase & original description: CDS=114-785 0.02 OrthoFinder output from all 47 species
GSVIVT01033357001 RABA4D, ATRABA4D Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Lfl_g28692 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01882 RABA4D, ATRABA4D A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g096220.3.1 RABA3, ATRAB-A3,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Solyc03g064020.3.1 RABA4D,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Solyc11g010100.2.1 AtRABA4a,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Zm00001e000673_P001 AtRABA4a,... A-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Zm00001e012878_P002 AtRABA4a,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 172
No external refs found!