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  5. AMTR_s00060p00196600

AMTR_s00060p00196600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00060.141

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED23 component


Gene families : OG_01_0006926 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006926_tree ,
OG_02_0005266 (LandPlants) Phylogenetic Tree(s): OG_02_0005266_tree ,
OG_03_0005449 (SeedPlants) Phylogenetic Tree(s): OG_03_0005449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00060p00196600
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT1G23230 No alias CONTAINS InterPro DOMAIN/s: Mediator complex subunit... 0.06 Archaeplastida
GSVIVT01011680001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.07 Archaeplastida
Gb_41520 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 Archaeplastida
LOC_Os02g49992.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.06 Archaeplastida
MA_10281498g0010 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 Archaeplastida
MA_10430175g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c27_2940V3.1 No alias No annotation 0.04 Archaeplastida
Solyc05g016440.3.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.08 Archaeplastida
Solyc05g016460.2.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.05 Archaeplastida
Zm00001e015737_P001 No alias component MED23 of tail module of MEDIATOR transcription... 0.07 Archaeplastida
AT1G23230 No alias CONTAINS InterPro DOMAIN/s: Mediator complex subunit... 0.06 LandPlants
GSVIVT01011680001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.06 LandPlants
Gb_41520 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 LandPlants
LOC_Os02g49992.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.06 LandPlants
MA_10281498g0010 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 LandPlants
MA_10430175g0010 No alias no hits & (original description: none) 0.04 LandPlants
Pp3c27_2940V3.1 No alias No annotation 0.03 LandPlants
Solyc05g016440.3.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.07 LandPlants
Solyc05g016460.2.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 LandPlants
Zm00001e015737_P001 No alias component MED23 of tail module of MEDIATOR transcription... 0.06 LandPlants
AT1G23230 No alias CONTAINS InterPro DOMAIN/s: Mediator complex subunit... 0.06 SeedPlants
GSVIVT01011680001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.06 SeedPlants
Gb_41520 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 SeedPlants
LOC_Os02g49992.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.06 SeedPlants
MA_10281498g0010 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 SeedPlants
MA_10430175g0010 No alias no hits & (original description: none) 0.04 SeedPlants
Solyc05g016440.3.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.07 SeedPlants
Solyc05g016460.2.1 No alias component MED23 of tail module of MEDIATOR transcription... 0.03 SeedPlants
Zm00001e015737_P001 No alias component MED23 of tail module of MEDIATOR transcription... 0.06 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR021629 Mediator_Med23 455 1159
No external refs found!