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  5. MA_10427738g0010

MA_10427738g0010


Description : Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 OS=Arabidopsis thaliana (sp|f4jrj6|deah9_arath : 264.0)


Gene families : OG0000141 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427738g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g109512 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Cre01.g043850 No alias Protein modification.phosphorylation.TKL kinase... 0.02 OrthoFinder output from all 47 species
GSVIVT01029147001 No alias Protein modification.phosphorylation.TKL kinase... 0.03 OrthoFinder output from all 47 species
Gb_39555 No alias protein kinase (MAP3K-RAF) 0.03 OrthoFinder output from all 47 species
MA_132807g0010 No alias Enzyme classification.EC_2 transferases.EC_2.7... 0.02 OrthoFinder output from all 47 species
Nbi_g03867 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ore_g02669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g16648 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Ore_g28882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23778 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016280 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025742 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g08956 No alias EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Solyc02g031860.3.1 Solyc02g031860 Probable serine/threonine-protein kinase SIS8... 0.04 OrthoFinder output from all 47 species
Zm00001e029748_P003 Zm00001e029748 protein kinase (MAP3K-RAF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 1141 1228
IPR000270 PB1_dom 39 125
No external refs found!