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  5. MA_10427644g0030

MA_10427644g0030


Description : Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana (sp|q9asp6|hnrpq_arath : 123.0)


Gene families : OG0000677 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000677_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427644g0030

Target Alias Description ECC score Gene Family Method Actions
Adi_g075764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089100 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01827 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g01919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015774001 No alias Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g09447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44161 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g07984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 399 463
IPR000504 RRM_dom 222 290
IPR000504 RRM_dom 302 368
No external refs found!