LOC_Os06g05350 (Os06g0145800)


Aliases : Os06g0145800

Description : 27.3.82 RNA.regulation of transcription.plant TF (pbf2) Encodes a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to the plastid and not the nucleus. WHIRLY 3 (WHY3)


Gene families : OG_01_0002121 (Gene family) Phylogenetic Tree(s): OG0002121_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g05350
Cluster HCCA cluster: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT2G02740 WHY3, PTAC11, ATWHY3 ssDNA-binding transcriptional regulator 0.05 Gene family
GSVIVT01020061001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.08 Gene family
Smo84708 PACid_15419262 No description available 0.02 Gene family
Solyc05g007100.3.1 Solyc05g007100.3 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Zm00001d036148 GRMZM2G155662 27.3.82 RNA.regulation of transcription.plant TF (pbf2)... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0006952 defense response IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013742 Whirly 98 232
No external refs found!