1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10427534g0030

MA_10427534g0030


Description : OLI2 LSU processome maturation factor


Gene families : OG0004210 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004210_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427534g0030

Target Alias Description ECC score Gene Family Method Actions
AT4G26600 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.09 OrthoFinder output from all 47 species
AT5G55920 OLI2 S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
Adi_g015441 No alias rRNA methyltransferase *(NOP2) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g02479 No alias rRNA methyltransferase *(NOP2) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G044600.1 Ceric.38G044600 rRNA methyltransferase *(NOP2) & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000114.21 OLI2 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Cre06.g273413 OLI2 Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g13909 No alias rRNA methyltransferase *(NOP2) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23563 OLI2 rRNA methyltransferase *(NOP2) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09182 No alias rRNA methyltransferase *(NOP2) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014717001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01014718001 OLI2 Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_02482 No alias OLI2 LSU processome maturation factor 0.03 OrthoFinder output from all 47 species
LOC_Os02g49270.1 LOC_Os02g49270 OLI2 LSU processome maturation factor 0.03 OrthoFinder output from all 47 species
LOC_Os09g37860.1 LOC_Os09g37860 OLI2 LSU processome maturation factor 0.05 OrthoFinder output from all 47 species
Mp6g04100.1 No alias OLI2 LSU processome maturation factor 0.05 OrthoFinder output from all 47 species
Ore_g19331 OLI2 rRNA methyltransferase *(NOP2) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12515 No alias rRNA methyltransferase *(NOP2) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016553 No alias rRNA methyltransferase *(NOP2) & original description: CDS=1-1836 0.03 OrthoFinder output from all 47 species
Sam_g17866 No alias rRNA methyltransferase *(NOP2) & original description: none 0.04 OrthoFinder output from all 47 species
Smo437511 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc07g052110.4.1 Solyc07g052110 OLI2 LSU processome maturation factor 0.07 OrthoFinder output from all 47 species
Spa_g52054 No alias rRNA methyltransferase *(NOP2) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07555 OLI2 rRNA methyltransferase *(NOP2) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e015692_P001 Zm00001e015692 OLI2 LSU processome maturation factor 0.05 OrthoFinder output from all 47 species
Zm00001e023394_P001 Zm00001e023394 OLI2 LSU processome maturation factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR031341 Methyltr_RsmF_N 221 302
No external refs found!