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  5. MA_10427183g0010

MA_10427183g0010 (TTN7, SMC3)


Aliases : TTN7, SMC3

Description : component SMC3/TTN7 of cohesin regulator complex


Gene families : OG0003981 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003981_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10427183g0010

Target Alias Description ECC score Gene Family Method Actions
AT2G27170 TTN7, SMC3 Structural maintenance of chromosomes (SMC) family protein 0.03 OrthoFinder output from all 47 species
Aob_g19956 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene20315.t1 TTN7, SMC3,... component *(SMC3/TTN7) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Azfi_s0147.g053026 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Cba_g02732 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Ceric.05G021600.1 TTN7, SMC3,... component *(SMC3/TTN7) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Cre10.g445650 TTN7, SMC3 Cell cycle.mitosis and meiosis.sister chromatid... 0.01 OrthoFinder output from all 47 species
Dcu_g09520 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g01683 TTN7, SMC3 component *(SMC3/TTN7) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01033181001 TTN7, SMC3 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
MA_182035g0010 TTN7, SMC3 Structural maintenance of chromosomes protein 3... 0.03 OrthoFinder output from all 47 species
Solyc06g073780.4.1 TTN7, SMC3,... component SMC3/TTN7 of cohesin regulator complex 0.02 OrthoFinder output from all 47 species
Zm00001e032592_P001 TTN7, SMC3,... component SMC3/TTN7 of cohesin regulator complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0051276 chromosome organization IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010935 SMC_hinge 4 88
No external refs found!