LOC_Os06g04800 (Os06g0139900)

Aliases : Os06g0139900

Description : 29.5.11.20 protein.degradation.ubiquitin.proteasom Encodes 20S proteasome subunit PBA1 (PBA1). PBA1

Gene families : OG_01_0004265 (Gene family) Phylogenetic Tree(s): OG0004265_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): LOC_Os06g04800
Cluster	HCCA cluster: Cluster_3

Target	Alias	Description	ECC score	Gene Family Method
AT4G31300	PBA1	N-terminal nucleophile aminohydrolases (Ntn hydrolases)...	0.1	Gene family
Cpa\|evm.model.tig00001098.5	No alias	29.5.11.20 protein.degradation.ubiquitin.proteasom...	0.05	Gene family
Cre06.g279000	No alias	29.5.11.20 protein.degradation.ubiquitin.proteasom...	0.08	Gene family
Cre12.g531100	No alias	29.5.11.20 protein.degradation.ubiquitin.proteasom...	0.05	Gene family
GSVIVT01032253001	No alias	29.5.11.20 protein.degradation.ubiquitin.proteasom...	0.05	Gene family
Smo227897	PACid_15407865	29.5.11.20 protein.degradation.ubiquitin.proteasom...	0.05	Gene family
Solyc07g016200.3.1	Solyc07g016200.3	29.5.11.20 protein.degradation.ubiquitin.proteasom...	0.05	Gene family
Zm00001d036108	GRMZM2G152775	29.5.11.20 protein.degradation.ubiquitin.proteasom...	0.08	Gene family
Zm00001d045403	GRMZM2G002976,...	29.5.11.20 protein.degradation.ubiquitin.proteasom...	0.1	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	InterProScan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEA	InterProScan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	24	204

External Links

No external refs found!