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  5. MA_10426836g0010

MA_10426836g0010 (SWI3A, CHB1, ATSWI3A)


Aliases : SWI3A, CHB1, ATSWI3A

Description : component BAF255/170 of chromatin remodeling complex


Gene families : OG0000817 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000817_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10426836g0010

Target Alias Description ECC score Gene Family Method Actions
Ala_g02418 CHB3, ATSWI3D SMARCC component *(SWI3) of chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Aop_g08555 CHB4, SWI3C, ATSWI3C SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Cba_g15169 CHB3, ATSWI3D SMARCC component *(SWI3) of chromatin remodeling complex... 0.02 OrthoFinder output from all 47 species
Ceric.03G090000.1 CHB4, SWI3C,... SMARCC component *(SWI3) of chromatin remodeling complex... 0.05 OrthoFinder output from all 47 species
Ceric.18G048000.1 SWI3A, CHB1,... SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Dac_g10520 CHB3, ATSWI3D SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
LOC_Os04g01970.1 CHB3, ATSWI3D,... component BAF255/170 of chromatin remodeling complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g07730.1 CHB4, SWI3C,... component BAF255/170 of chromatin remodeling complex 0.02 OrthoFinder output from all 47 species
Smo442222 SWI3A, CHB1, ATSWI3A Chromatin organisation.chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Spa_g14657 CHB4, SWI3C, ATSWI3C SMARCC component *(SWI3) of chromatin remodeling complex... 0.03 OrthoFinder output from all 47 species
Zm00001e018409_P001 CHB4, SWI3C,... component BAF255/170 of chromatin remodeling complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007526 SWIRM 2 51
IPR032451 SMARCC_C 429 505
IPR001005 SANT/Myb 200 238
No external refs found!