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  5. MA_10426810g0010

MA_10426810g0010


Description : Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana (sp|o04491|ppr26_arath : 518.0)


Gene families : OG0002597 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002597_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10426810g0010
Cluster HCCA: Cluster_333

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00080p00074320 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g26680,... 0.01 OrthoFinder output from all 47 species
Solyc07g047620.3.1 Solyc07g047620 Pentatricopeptide repeat-containing protein At4g26680,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 277 326
IPR002885 Pentatricopeptide_repeat 455 500
IPR002885 Pentatricopeptide_repeat 211 256
IPR002885 Pentatricopeptide_repeat 522 569
IPR002885 Pentatricopeptide_repeat 383 431
IPR002885 Pentatricopeptide_repeat 176 205
IPR002885 Pentatricopeptide_repeat 343 375
No external refs found!