1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp8g08070.1

Mp8g08070.1


Description : SSU processome assembly factor (TOZ)


Gene families : OG_01_0003962 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003962_tree ,
OG_02_0005807 (LandPlants) Phylogenetic Tree(s): OG_02_0005807_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g08070.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
AT5G16750 TOZ Transducin family protein / WD-40 repeat family protein 0.11 Archaeplastida
Cpa|evm.model.tig00000704.61 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
Cre07.g344050 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 Archaeplastida
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 Archaeplastida
Gb_13772 No alias SSU processome assembly factor (TOZ) 0.06 Archaeplastida
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.13 Archaeplastida
MA_10426255g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10601g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10601g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_566936g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c19_12460V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.08 Archaeplastida
Smo80645 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 Archaeplastida
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.1 Archaeplastida
Zm00001e007090_P001 No alias SSU processome assembly factor (TOZ) 0.05 Archaeplastida
Zm00001e041546_P002 No alias SSU processome assembly factor (TOZ) 0.06 Archaeplastida
AMTR_s00048p00053570 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 LandPlants
AT5G16750 TOZ Transducin family protein / WD-40 repeat family protein 0.11 LandPlants
GSVIVT01024351001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 LandPlants
Gb_13772 No alias SSU processome assembly factor (TOZ) 0.06 LandPlants
LOC_Os04g50660.1 No alias SSU processome assembly factor (TOZ) 0.11 LandPlants
MA_10426255g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_566936g0010 No alias no hits & (original description: none) 0.03 LandPlants
Pp3c19_12460V3.1 No alias Transducin family protein / WD-40 repeat family protein 0.07 LandPlants
Smo80645 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 LandPlants
Solyc03g097160.4.1 No alias SSU processome assembly factor (TOZ) 0.1 LandPlants
Zm00001e007090_P001 No alias SSU processome assembly factor (TOZ) 0.04 LandPlants
Zm00001e041546_P002 No alias SSU processome assembly factor (TOZ) 0.05 LandPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
BP GO:0006364 rRNA processing IEA Interproscan
CC GO:0032040 small-subunit processome IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 379 419
IPR001680 WD40_repeat 180 217
IPR001680 WD40_repeat 423 461
IPR001680 WD40_repeat 483 514
IPR001680 WD40_repeat 520 556
IPR001680 WD40_repeat 137 175
IPR001680 WD40_repeat 603 639
IPR001680 WD40_repeat 560 597
IPR001680 WD40_repeat 52 89
IPR001680 WD40_repeat 93 131
IPR013934 SSU_processome_Utp13 661 795
No external refs found!