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  5. MA_10426583g0010

MA_10426583g0010


Description : C3H zinc finger transcription factor


Gene families : OG0000627 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10426583g0010

Target Alias Description ECC score Gene Family Method Actions
Ceric.26G049200.1 Ceric.26G049200 not classified & original description: pacid=50600373... 0.03 OrthoFinder output from all 47 species
GSVIVT01030048001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
GSVIVT01037782001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
LOC_Os08g03310.1 LOC_Os08g03310 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Tin_g05643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020869_P004 Zm00001e020869 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 396 442
IPR025605 OST-HTH/LOTUS_dom 276 353
IPR000571 Znf_CCCH 232 252
No external refs found!