1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10426266g0010

MA_10426266g0010 (HAP1, MEE63, MAGO)


Aliases : HAP1, MEE63, MAGO

Description : component Magoh of RNA quality control Exon Junction complex


Gene families : OG0003958 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003958_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10426266g0010
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Adi_g040716 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Ceric.04G042200.1 HAP1, MEE63,... component *(Magoh) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Cre09.g392692 HAP1, MEE63, MAGO RNA processing.RNA quality control Exon Junction complex... 0.04 OrthoFinder output from all 47 species
Dcu_g06707 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.02 OrthoFinder output from all 47 species
Dcu_g07294 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.06 OrthoFinder output from all 47 species
LOC_Os08g01660.1 HAP1, MEE63,... component Magoh of RNA quality control Exon Junction complex 0.02 OrthoFinder output from all 47 species
LOC_Os12g18880.1 HAP1, MEE63,... component Magoh of RNA quality control Exon Junction complex 0.03 OrthoFinder output from all 47 species
Lfl_g37072 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Pp3c1_16440V3.1 HAP1, MEE63,... mago nashi family protein 0.03 OrthoFinder output from all 47 species
Pp3c2_21720V3.1 HAP1, MEE63,... mago nashi family protein 0.02 OrthoFinder output from all 47 species
Spa_g09540 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Tin_g08945 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species
Tin_g23631 HAP1, MEE63, MAGO component *(Magoh) of RNA quality control Exon Junction... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEA Interproscan
CC GO:0035145 exon-exon junction complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR004023 Mago_nashi 8 133
No external refs found!