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Aliases : QRT3
Description : polygalacturonase (QRT3)
Gene families : OG0004265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004265_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00319p00013650 | QRT3,... | Polygalacturonase QRT3 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s03255p00000400 | QRT3,... | Cell wall.pectin.modification and... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s05553p00004300 | QRT3,... | Cell wall.pectin.modification and... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g46991 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene34070.t1 | QRT3, Aspi01Gene34070 | polygalacturonase *(QRT3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g31759 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01012138001 | No alias | Cell wall.pectin.modification and... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01029528001 | QRT3 | Cell wall.pectin.modification and... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g58007 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_68608g0020 | QRT3 | polygalacturonase (QRT3) | 0.04 | OrthoFinder output from all 47 species | |
| MA_917578g0010 | QRT3 | polygalacturonase (QRT3) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g44003 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g29972 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13496 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g38130 | QRT3 | polygalacturonase *(QRT3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e006958_P005 | QRT3, Zm00001e006958 | polygalacturonase (QRT3) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR024535 | Pectate_lyase_SF_prot | 98 | 281 |
| No external refs found! |