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Aliases : HTA7
Description : histone (H2A)
Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G08880 | GAMMA-H2AX,... | Histone superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT1G51060 | HTA10 | histone H2A 10 | 0.07 | OrthoFinder output from all 47 species | |
| AT1G54690 | GAMMA-H2AX,... | gamma histone variant H2AX | 0.14 | OrthoFinder output from all 47 species | |
| AT4G27230 | HTA2 | histone H2A 2 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G27670 | HTA7 | histone H2A 7 | 0.05 | OrthoFinder output from all 47 species | |
| AT5G59870 | HTA6 | histone H2A 6 | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g005118 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g052170 | HTA10 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28150 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00274 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33279.t1 | HTA2, Aspi01Gene33279 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009474 | GAMMA-H2AX,... | histone *(H2A) & original description: CDS=131-538 | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0027.g023695 | GAMMA-H2AX,... | histone *(H2A) & original description: CDS=291-701 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0102.g044568 | HTA6 | histone *(H2A) & original description: CDS=1-438 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0678.g081837 | HTA10 | histone *(H2A) & original description: CDS=127-525 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G127000.1 | HTA7, Ceric.01G127000 | histone *(H2A) & original description: pacid=50592416... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G127100.1 | HTA6, Ceric.01G127100 | histone *(H2A) & original description: pacid=50591885... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G127200.1 | HTA6, Ceric.01G127200 | histone *(H2A) & original description: pacid=50591993... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.06G046500.1 | HTA7, Ceric.06G046500 | histone *(H2A) & original description: pacid=50619602... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G083100.1 | HTA7, Ceric.11G083100 | histone *(H2A) & original description: pacid=50596723... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z006200.1 | HTA7, Ceric.1Z006200 | histone *(H2A) & original description: pacid=50569283... | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g264750 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre06.g264950 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g265350 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g266700 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g268050 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g268300 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g271350 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g273900 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g274200 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g274800 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g275850 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g276500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g276950 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g504500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g504750 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g505550 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre12.g506250 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre13.g570100 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g708550 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre17.g709200 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre17.g710400 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Cre17.g711700 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre17.g713400 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| Cre17.g714500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g06372 | HTA6 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01002746001 | RAT5, HTA1, ATHTA1 | Chromatin organisation.histones.H2A-type histone | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01011034001 | GAMMA-H2AX,... | Chromatin organisation.histones.H2A-type histone | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014580001 | No alias | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06384 | HTA6 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25326 | GAMMA-H2AX,... | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_29778 | HTA7 | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g17100.1 | HTA12, LOC_Os03g17100 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os08g33100.1 | HTA2, LOC_Os08g33100 | histone (H2A) | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g21938 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g37655 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g39507 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c10_13610V3.1 | GAMMA-H2AX,... | gamma histone variant H2AX | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c5_1791V3.1 | HTA10, Pp3c5_1791 | histone H2A 10 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c5_1800V3.1 | HTA10, Pp3c5_1800 | histone H2A 10 | 0.02 | OrthoFinder output from all 47 species | |
| Smo166626 | RAT5, HTA1, ATHTA1 | Chromatin organisation.histones.H2A-type histone | 0.05 | OrthoFinder output from all 47 species | |
| Smo170948 | GAMMA-H2AX,... | Chromatin organisation.histones.H2A-type histone | 0.06 | OrthoFinder output from all 47 species | |
| Smo73637 | GAMMA-H2AX,... | Chromatin organisation.histones.H2A-type histone | 0.05 | OrthoFinder output from all 47 species | |
| Smo76653 | HTA2 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g099410.3.1 | HTA7, Solyc01g099410 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g005220.4.1 | GAMMA-H2AX,... | histone (H2A) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc06g084430.4.1 | GAMMA-H2AX,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g010400.3.1 | HTA12, Solyc09g010400 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g074300.1.1 | GAMMA-H2AX,... | histone (H2A) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc10g006560.4.1 | HTA10, Solyc10g006560 | histone (H2A) | 0.11 | OrthoFinder output from all 47 species | |
| Solyc11g073250.2.1 | HTA12, Solyc11g073250 | histone (H2A) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g005270.2.1 | HTA10, Solyc12g005270 | histone (H2A) | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g29751 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g03017 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010515_P001 | HTA2, Zm00001e010515 | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012144_P001 | GAMMA-H2AX,... | histone (H2A) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e035183_P002 | RAT5, HTA1,... | histone (H2A) | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEA | Interproscan |
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| No external refs found! |