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  5. MA_103907g0010

MA_103907g0010


Description : transcription factor (ARID)


Gene families : OG0002366 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002366_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_103907g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g111878 No alias ARID-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14261 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13980 No alias ARID-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G004900.1 Ceric.20G004900 ARID-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g14994 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09897 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026435001 No alias RNA biosynthesis.transcriptional activation.ARID... 0.04 OrthoFinder output from all 47 species
Gb_18614 No alias transcription factor (ARID) 0.02 OrthoFinder output from all 47 species
Len_g44864 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g07310.1 No alias transcription factor (ARID) 0.02 OrthoFinder output from all 47 species
Ore_g04475 No alias ARID-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02235 No alias ARID-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11306 No alias ARID-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00887 No alias ARID-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e037576_P002 Zm00001e037576 transcription factor (ARID) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001606 ARID_dom 310 394
No external refs found!