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  5. MA_103885g0010

MA_103885g0010 (ATML1)


Aliases : ATML1

Description : transcription factor (HD-ZIP IV)


Gene families : OG0000253 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000253_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_103885g0010

Target Alias Description ECC score Gene Family Method Actions
AT4G04890 PDF2 protodermal factor 2 0.03 OrthoFinder output from all 47 species
Als_g05720 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07199 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17663 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.29G064400.1 ATML1, Ceric.29G064400 HD-ZIP IV-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g15269 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05023 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15559 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20385 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030605001 HDG2 RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Gb_16030 PDF2 transcription factor (HD-ZIP IV) 0.07 OrthoFinder output from all 47 species
LOC_Os02g45250.1 HDG1, HD-GL2-1,... transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species
LOC_Os08g04190.1 PDF2, LOC_Os08g04190 transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
LOC_Os09g35760.1 HDG1, HD-GL2-1,... transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Mp7g09710.1 ATML1 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Nbi_g13220 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013927 PDF2 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0235.g026541 ATML1 HD-ZIP IV-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g091630.3.1 ANL2, AHDP,... transcription factor (HD-ZIP IV) 0.03 OrthoFinder output from all 47 species
Solyc03g120620.3.1 GL2, Solyc03g120620 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Solyc10g005330.3.1 PDF2, Solyc10g005330 transcription factor (HD-ZIP IV) 0.04 OrthoFinder output from all 47 species
Spa_g51145 ATML1 HD-ZIP IV-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31372 PDF2 HD-ZIP IV-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006870_P004 HDG2, Zm00001e006870 transcription factor (HD-ZIP IV) 0.05 OrthoFinder output from all 47 species
Zm00001e040312_P001 PDF2, Zm00001e040312 transcription factor (HD-ZIP IV) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 6 142
No external refs found!