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  5. MA_10342832g0010

MA_10342832g0010


Description : Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana (sp|q9skq4|pp167_arath : 182.0)


Gene families : OG0016896 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0016896_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10342832g0010

Target Alias Description ECC score Gene Family Method Actions
MA_156062g0010 No alias Pentatricopeptide repeat-containing protein At5g59600... 0.09 OrthoFinder output from all 47 species
MA_388061g0010 CRR21 Pentatricopeptide repeat-containing protein At2g35030,... 0.09 OrthoFinder output from all 47 species
Pnu_g04363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 194 217
IPR002885 Pentatricopeptide_repeat 221 251
IPR002885 Pentatricopeptide_repeat 92 116
IPR002885 Pentatricopeptide_repeat 252 281
IPR002885 Pentatricopeptide_repeat 118 165
No external refs found!