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  5. MA_10340733g0010

MA_10340733g0010


Description : F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana (sp|q9m8l2|fbk30_arath : 129.0)


Gene families : OG0000998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000998_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10340733g0010
Cluster HCCA: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
MA_10302644g0010 No alias F-box/kelch-repeat protein At1g80440 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10314385g0010 No alias F-box/kelch-repeat protein At2g44130 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_10329796g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10346499g0010 No alias F-box/kelch-repeat protein At2g44130 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10352800g0010 No alias F-box/kelch-repeat protein At2g44130 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_10807g0010 No alias F-box/kelch-repeat protein At1g15670 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_108164g0010 No alias F-box/kelch-repeat protein At2g44130 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_136319g0010 No alias F-box/kelch-repeat protein At1g80440 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
MA_138634g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_163756g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
MA_168996g0010 No alias F-box/kelch-repeat protein At1g80440 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_171359g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_173638g0010 No alias F-box/kelch-repeat protein At2g44130 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_20918g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_43608g0010 No alias F-box/kelch-repeat protein At1g80440 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_6187g0010 No alias F-box/kelch-repeat protein At2g44130 OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
MA_62027g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_781345g0010 No alias F-box/kelch-repeat protein At2g44130 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_81100g0010 No alias F-box/kelch-repeat protein At2g44130 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_83684g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_9990959g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000350 generation of catalytic spliceosome for second transesterification step IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 146 187
IPR006652 Kelch_1 97 138
No external refs found!