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  5. MA_10340614g0010

MA_10340614g0010


Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 191.0)


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10340614g0010
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Adi_g015980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g068319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g088961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26402.t1 Aspi01Gene26402 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33261.t1 Aspi01Gene33261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72146.t1 Aspi01Gene72146 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g059948 No alias not classified & original description: CDS=716-2137 0.02 OrthoFinder output from all 47 species
Dac_g01678 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16051 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_4551106g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022149 No alias not classified & original description: CDS=278-1477 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 110 167
IPR000504 RRM_dom 8 68
No external refs found!