LOC_Os06g01400 (Os06g0103600)


Aliases : Os06g0103600

Description : 29.1.14 protein.aa activation.glycine-tRNA ligase glycine-tRNA ligase EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1)


Gene families : OG_01_0007747 (Gene family) Phylogenetic Tree(s): OG0007747_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g01400
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001466.1 No alias 29.1.14 protein.aa activation.glycine-tRNA ligase... 0.03 Gene family
Cre10.g433000 No alias 29.1.14 protein.aa activation.glycine-tRNA ligase... 0.06 Gene family
GSVIVT01018288001 No alias 29.1.14 protein.aa activation.glycine-tRNA ligase... 0.03 Gene family
Solyc01g090200.3.1 Solyc01g090200.3 29.1.14 protein.aa activation.glycine-tRNA ligase... 0.02 Gene family
Zm00001d045605 No alias 29.1.14 protein.aa activation.glycine-tRNA ligase... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004820 glycine-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
CC GO:0005737 cytoplasm IEA InterProScan
BP GO:0006426 glycyl-tRNA aminoacylation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002310 Gly-tRNA_ligase_asu 74 351
IPR015944 Gly-tRNA-synth_bsu 386 930
No external refs found!