LOC_Os06g01304 (Os06g0102700, Os06g0102750)

Aliases : Os06g0102700, Os06g0102750

Description : protein.degradation.ubiquitin.E3.RING Encodes a protein with a typical U-box domain followed by an Armadillo repeat region, a domain organization that is frequently found in plant U-box proteins. Displays ubiquitin ligase activity in vitro. plant U-box 14 (PUB14)

Gene families : OG_01_0001127 (Gene family) Phylogenetic Tree(s): OG0001127_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g01304
Cluster HCCA cluster: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
AT3G54850 PUB14, ATPUB14 plant U-box 14 0.03 Gene family
GSVIVT01016225001 No alias protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
LOC_Os02g49950 Os02g0732200 protein.degradation.ubiquitin.E3.RING ARM... 0.03 Gene family
LOC_Os03g16824 Os03g0275900 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_27512g0010 No alias 20.1 stress.biotic Plant U-Box 15 (PUB15) 0.01 Gene family
Solyc11g008390.2.1 Solyc11g008390.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d039722 No alias protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000225 Armadillo 437 475
IPR000225 Armadillo 355 393
IPR000225 Armadillo 397 434
IPR003613 Ubox_domain 228 298
No external refs found!