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  5. MA_10316984g0010

MA_10316984g0010


Description : group-II intron mitochondrial splicing factor (MISF74)


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10316984g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00045650 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g52640,... 0.02 OrthoFinder output from all 47 species
Aev_g04119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010329001 No alias Pentatricopeptide repeat-containing protein At3g04130,... 0.08 OrthoFinder output from all 47 species
Gb_13617 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.03 OrthoFinder output from all 47 species
Gb_20376 No alias group-II intron mitochondrial splicing factor (MISF68) 0.03 OrthoFinder output from all 47 species
Gb_21594 No alias Pentatricopeptide repeat-containing protein At1g71060,... 0.08 OrthoFinder output from all 47 species
Gb_22860 No alias Pentatricopeptide repeat-containing protein At1g77360,... 0.07 OrthoFinder output from all 47 species
MA_86400g0010 No alias Pentatricopeptide repeat-containing protein At5g18390,... 0.05 OrthoFinder output from all 47 species
Smo90583 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.03 OrthoFinder output from all 47 species
Solyc03g113750.3.1 OTP43, Solyc03g113750 OTP43 mitochondrial RNA splicing factor 0.05 OrthoFinder output from all 47 species
Solyc11g071670.2.1 Solyc11g071670 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 78 102
IPR002885 Pentatricopeptide_repeat 110 138
IPR002885 Pentatricopeptide_repeat 38 68
IPR002885 Pentatricopeptide_repeat 312 343
IPR002885 Pentatricopeptide_repeat 206 239
IPR002885 Pentatricopeptide_repeat 245 294
IPR002885 Pentatricopeptide_repeat 144 189
No external refs found!