1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10232509g0010

MA_10232509g0010


Description : Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana (sp|o22160|tl15a_arath : 129.0)


Gene families : OG0007302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007302_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10232509g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00257960 evm_27.TU.AmTr_v1... Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.01 OrthoFinder output from all 47 species
AT2G44920 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g053093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G001200.1 Ceric.01G001200 not classified & original description: pacid=50590454... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021038.68 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre16.g687300 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Dde_g13753 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g05414 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os01g05080.1 LOC_Os01g05080 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g19840 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g06080.1 No alias Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g04471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06581 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g00349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59221 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022678 No alias not classified & original description: CDS=682-1350 0.04 OrthoFinder output from all 47 species
Spa_g39405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14674 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e025798_P001 Zm00001e025798 Thylakoid lumenal 15 kDa protein 1, chloroplastic... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 131 153
No external refs found!