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  5. MA_10204983g0010

MA_10204983g0010


Description : NOB1 pre-rRNA processing endonuclease involved in ITS1 rRNA removal. endonuclease (NOB1)


Gene families : OG0006353 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006353_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10204983g0010

Target Alias Description ECC score Gene Family Method Actions
Ore_g18909 No alias pre-rRNA processing endonuclease involved in ITS1 rRNA... 0.02 OrthoFinder output from all 47 species
Tin_g10038 No alias pre-rRNA processing endonuclease involved in ITS1 rRNA... 0.02 OrthoFinder output from all 47 species
Zm00001e025376_P003 Zm00001e025376 NOB1 pre-rRNA processing endonuclease involved in ITS1... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP HCCA
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0001671 ATPase activator activity IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
CC GO:0008250 oligosaccharyltransferase complex IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR014881 NOB1_Zn-bd 536 597
IPR033411 Ribonuclease_PIN 65 152
No external refs found!