LOC_Os05g49860 (Os05g0574300)


Aliases : Os05g0574300

Description : 28.1.3.2.2 DNA.synthesis/chromatin structure.histone.core.H2B HTB4


Gene families : OG_01_0000162 (Gene family) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os05g49860
Cluster HCCA cluster: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AT1G07790 HTB1 Histone superfamily protein 0.08 Gene family
AT2G37470 No alias Histone superfamily protein 0.06 Gene family
AT3G45980 HTB9, H2B Histone superfamily protein 0.09 Gene family
AT3G46030 HTB11 Histone superfamily protein 0.03 Gene family
AT5G22880 HTB2, H2B histone B2 0.07 Gene family
AT5G59910 HTB4 Histone superfamily protein 0.06 Gene family
GSVIVT01016164001 No alias 28.1.3.2.2 DNA.synthesis/chromatin... 0.03 Gene family
GSVIVT01025021001 No alias No description available 0.03 Gene family
GSVIVT01025023001 No alias 28.1.3.2.2 DNA.synthesis/chromatin... 0.03 Gene family
GSVIVT01025025001 No alias 28.1.3.2.2 DNA.synthesis/chromatin... 0.03 Gene family
LOC_Os01g05610 Os01g0149400 No description available 0.01 Gene family
MA_10428006g0010 No alias No description available 0.01 Gene family
MA_10434433g0010 No alias No description available 0.01 Gene family
MA_10435143g0010 No alias No description available 0.04 Gene family
MA_10435143g0020 No alias No description available 0.03 Gene family
MA_10436516g0010 No alias No description available 0.03 Gene family
MA_13454g0010 No alias No description available 0.01 Gene family
MA_38565g0010 No alias No description available 0.02 Gene family
MA_6078786g0010 No alias 28.1.3.2.2 DNA.synthesis/chromatin... 0.07 Gene family
MA_77198g0010 No alias No description available 0.04 Gene family
MA_9293473g0010 No alias No description available 0.02 Gene family
Smo182308 PACid_15418220 No description available 0.02 Gene family
Smo73644 PACid_15408400 No description available 0.01 Gene family
Solyc02g038690.1.1 Solyc02g038690.1 No description available 0.05 Gene family
Solyc03g071620.1.1 Solyc03g071620.1 28.1.3.2.2 DNA.synthesis/chromatin... 0.04 Gene family
Solyc05g055440.1.1 Solyc05g055440.1 No description available 0.04 Gene family
Solyc06g074780.2.1 Solyc06g074780.2 28.1.3.2.2 DNA.synthesis/chromatin... 0.05 Gene family
Solyc06g075800.1.1 Solyc06g075800.1 No description available 0.09 Gene family
Solyc11g066430.1.1 Solyc11g066430.1 No description available 0.08 Gene family
Solyc12g013510.1.1 Solyc12g013510.1 No description available 0.03 Gene family
Zm00001d005789 GRMZM2G057852 No description available 0.04 Gene family
Zm00001d007084 GRMZM2G141432 No description available 0.03 Gene family
Zm00001d011236 GRMZM2G304575 28.1.3.2.1 DNA.synthesis/chromatin... 0.04 Gene family
Zm00001d012423 GRMZM2G112912 28.1.3.2.1 DNA.synthesis/chromatin... 0.01 Gene family
Zm00001d020580 GRMZM2G071959 No description available 0.06 Gene family
Zm00001d025913 GRMZM2G046841 28.1.3.2.1 DNA.synthesis/chromatin... 0.14 Gene family
Zm00001d032070 GRMZM2G401147 No description available 0.1 Gene family
Zm00001d039821 GRMZM2G163939 No description available 0.05 Gene family
Zm00001d042930 GRMZM2G306258 28.1.3.2.1 DNA.synthesis/chromatin... 0.05 Gene family
Zm00001d044247 GRMZM2G079089 No description available 0.07 Gene family
Zm00001d047788 GRMZM2G305027 No description available 0.01 Gene family
Zm00001d048491 GRMZM2G472696,... 28.1.3.2.1 DNA.synthesis/chromatin... 0.11 Gene family
Zm00001d050100 GRMZM2G119071 28.1.3.2.1 DNA.synthesis/chromatin... 0.15 Gene family
Zm00001d051591 GRMZM2G342515 28.1.3.2.1 DNA.synthesis/chromatin... 0.07 Gene family

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan
MF GO:0003677 DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 3 128
No external refs found!